Phenotypic and genetic characterization of resistance in Arabidopsis thaliana to the oomycete pathogen Phytophthora parasitica.
Identifieur interne : 000E04 ( Main/Exploration ); précédent : 000E03; suivant : 000E05Phenotypic and genetic characterization of resistance in Arabidopsis thaliana to the oomycete pathogen Phytophthora parasitica.
Auteurs : Yuling Meng [République populaire de Chine] ; Yihua Huang [République populaire de Chine] ; Qinhu Wang [République populaire de Chine] ; Qujiang Wen [République populaire de Chine] ; Jinbu Jia [République populaire de Chine] ; Qiang Zhang [République populaire de Chine] ; Guiyan Huang [République populaire de Chine] ; Junli Quan [République populaire de Chine] ; Weixing Shan [République populaire de Chine]Source :
- Frontiers in plant science [ 1664-462X ] ; 2015.
Abstract
The interaction between Arabidopsis thaliana and the oomycete pathogen Phytophthora parasitica emerges as a model for exploring the molecular basis and evolution of recognition and host defense. Phenotypic variation and genetic analysis is essential to dissect the underlying mechanisms in plant-oomycete interaction. In this study, the reaction phenotypes of 28 A. thaliana accessions to P. parasitica strain Pp016 were examined using detached leaf infection assay. The results showed the presence of four distinct groups based on host response and disease development. Of all the accessions examined, Zurich (Zu-1) is highly resistant to P. parasitica. Microscopic characterization showed that rapid and severe hypersensitive response at the primary infection epidermal cells is associated with disease resistance. Furthermore, Zu-1 is resistant to a set of 20 diverse P. parasitica strains, which were collected from different host plants and exhibited differential specificities on a set of tobacco cultivars. However, Zu-1 is susceptible to P. parasitica when the root is inoculated, suggesting differential expression of associated resistance genes in the root and foliar tissues. Genetic analysis by crossing Zu-1 and the susceptible accession Landsberg (Ler) showed that the resistance in Zu-1 to P. parasitica is semi-dominant, as shown by infection assays of F1 progenies, and is likely conferred by a single locus, defined as RPPA1 (Zu-1) (for Resistance to P. parasitica 1), as shown by analysis of F2 segregating populations. By employing specific-locus amplified fragment sequencing (SLAF-seq) strategy to identify molecular markers potentially linked to the locus, the strongest associated region was determined to be located between 7.1 and 11.2 Mb in chromosome IV. The future cloning of RPPA1 (Zu-1) locus will facilitate improved understanding of plant broad-spectrum disease resistance to oomycete pathogens.
DOI: 10.3389/fpls.2015.00378
PubMed: 26074940
PubMed Central: PMC4445315
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State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Huang, Yihua" sort="Huang, Yihua" uniqKey="Huang Y" first="Yihua" last="Huang">Yihua Huang</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Qinhu" sort="Wang, Qinhu" uniqKey="Wang Q" first="Qinhu" last="Wang">Qinhu Wang</name><affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Wen, Qujiang" sort="Wen, Qujiang" uniqKey="Wen Q" first="Qujiang" last="Wen">Qujiang Wen</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Jia, Jinbu" sort="Jia, Jinbu" uniqKey="Jia J" first="Jinbu" last="Jia">Jinbu Jia</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Zhang, Qiang" sort="Zhang, Qiang" uniqKey="Zhang Q" first="Qiang" last="Zhang">Qiang Zhang</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Huang, Guiyan" sort="Huang, Guiyan" uniqKey="Huang G" first="Guiyan" last="Huang">Guiyan Huang</name><affiliation wicri:level="1"><nlm:affiliation>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Quan, Junli" sort="Quan, Junli" uniqKey="Quan J" first="Junli" last="Quan">Junli Quan</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author><author><name sortKey="Shan, Weixing" sort="Shan, Weixing" uniqKey="Shan W" first="Weixing" last="Shan">Weixing Shan</name><affiliation wicri:level="1"><nlm:affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling</wicri:regionArea><wicri:noRegion>Northwest A&F University Yangling</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The interaction between Arabidopsis thaliana and the oomycete pathogen Phytophthora parasitica emerges as a model for exploring the molecular basis and evolution of recognition and host defense. Phenotypic variation and genetic analysis is essential to dissect the underlying mechanisms in plant-oomycete interaction. In this study, the reaction phenotypes of 28 A. thaliana accessions to P. parasitica strain Pp016 were examined using detached leaf infection assay. The results showed the presence of four distinct groups based on host response and disease development. Of all the accessions examined, Zurich (Zu-1) is highly resistant to P. parasitica. Microscopic characterization showed that rapid and severe hypersensitive response at the primary infection epidermal cells is associated with disease resistance. Furthermore, Zu-1 is resistant to a set of 20 diverse P. parasitica strains, which were collected from different host plants and exhibited differential specificities on a set of tobacco cultivars. However, Zu-1 is susceptible to P. parasitica when the root is inoculated, suggesting differential expression of associated resistance genes in the root and foliar tissues. Genetic analysis by crossing Zu-1 and the susceptible accession Landsberg (Ler) showed that the resistance in Zu-1 to P. parasitica is semi-dominant, as shown by infection assays of F1 progenies, and is likely conferred by a single locus, defined as RPPA1 (Zu-1) (for Resistance to P. parasitica 1), as shown by analysis of F2 segregating populations. By employing specific-locus amplified fragment sequencing (SLAF-seq) strategy to identify molecular markers potentially linked to the locus, the strongest associated region was determined to be located between 7.1 and 11.2 Mb in chromosome IV. The future cloning of RPPA1 (Zu-1) locus will facilitate improved understanding of plant broad-spectrum disease resistance to oomycete pathogens. </div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">26074940</PMID><DateCompleted><Year>2015</Year><Month>06</Month><Day>15</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>6</Volume><PubDate><Year>2015</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Phenotypic and genetic characterization of resistance in Arabidopsis thaliana to the oomycete pathogen Phytophthora parasitica.</ArticleTitle><Pagination><MedlinePgn>378</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2015.00378</ELocationID><Abstract><AbstractText>The interaction between Arabidopsis thaliana and the oomycete pathogen Phytophthora parasitica emerges as a model for exploring the molecular basis and evolution of recognition and host defense. Phenotypic variation and genetic analysis is essential to dissect the underlying mechanisms in plant-oomycete interaction. In this study, the reaction phenotypes of 28 A. thaliana accessions to P. parasitica strain Pp016 were examined using detached leaf infection assay. The results showed the presence of four distinct groups based on host response and disease development. Of all the accessions examined, Zurich (Zu-1) is highly resistant to P. parasitica. Microscopic characterization showed that rapid and severe hypersensitive response at the primary infection epidermal cells is associated with disease resistance. Furthermore, Zu-1 is resistant to a set of 20 diverse P. parasitica strains, which were collected from different host plants and exhibited differential specificities on a set of tobacco cultivars. However, Zu-1 is susceptible to P. parasitica when the root is inoculated, suggesting differential expression of associated resistance genes in the root and foliar tissues. Genetic analysis by crossing Zu-1 and the susceptible accession Landsberg (Ler) showed that the resistance in Zu-1 to P. parasitica is semi-dominant, as shown by infection assays of F1 progenies, and is likely conferred by a single locus, defined as RPPA1 (Zu-1) (for Resistance to P. parasitica 1), as shown by analysis of F2 segregating populations. By employing specific-locus amplified fragment sequencing (SLAF-seq) strategy to identify molecular markers potentially linked to the locus, the strongest associated region was determined to be located between 7.1 and 11.2 Mb in chromosome IV. The future cloning of RPPA1 (Zu-1) locus will facilitate improved understanding of plant broad-spectrum disease resistance to oomycete pathogens. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Meng</LastName><ForeName>Yuling</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>Yihua</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Qinhu</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wen</LastName><ForeName>Qujiang</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jia</LastName><ForeName>Jinbu</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Qiang</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Huang</LastName><ForeName>Guiyan</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China ; College of Life Sciences, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Quan</LastName><ForeName>Junli</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Shan</LastName><ForeName>Weixing</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>College of Plant Protection, Northwest A&F University Yangling, China ; State Key Laboratory of Crop Stress Biology for Arid Areas, College of Plant Protection, Northwest A&F University Yangling, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>05</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Arabidopsis thaliana</Keyword><Keyword MajorTopicYN="N">Phytophthora parasitica</Keyword><Keyword MajorTopicYN="N">Zu-1</Keyword><Keyword MajorTopicYN="N">genetic analysis</Keyword><Keyword MajorTopicYN="N">resistance</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2015</Year><Month>02</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>05</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2015</Year><Month>6</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2015</Year><Month>6</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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last="Jia">Jinbu Jia</name><name sortKey="Quan, Junli" sort="Quan, Junli" uniqKey="Quan J" first="Junli" last="Quan">Junli Quan</name><name sortKey="Shan, Weixing" sort="Shan, Weixing" uniqKey="Shan W" first="Weixing" last="Shan">Weixing Shan</name><name sortKey="Wang, Qinhu" sort="Wang, Qinhu" uniqKey="Wang Q" first="Qinhu" last="Wang">Qinhu Wang</name><name sortKey="Wen, Qujiang" sort="Wen, Qujiang" uniqKey="Wen Q" first="Qujiang" last="Wen">Qujiang Wen</name><name sortKey="Zhang, Qiang" sort="Zhang, Qiang" uniqKey="Zhang Q" first="Qiang" last="Zhang">Qiang Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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